MATRAD_IMPORTGUI MATLAB code for matRad_importGUI.fig
MATRAD_IMPORTGUI, by itself, creates a new MATRAD_IMPORTGUI or raises the existing
singleton*.
H = MATRAD_IMPORTGUI returns the handle to a new MATRAD_IMPORTGUI or the handle to
the existing singleton*.
MATRAD_IMPORTGUI('CALLBACK',hObject,eventData,handles,...) calls the local
function named CALLBACK in MATRAD_IMPORTGUI.M with the given input arguments.
MATRAD_IMPORTGUI('Property','Value',...) creates a new MATRAD_IMPORTGUI or raises the
existing singleton*. Starting from the left, property value pairs are
applied to the GUI before matRad_importGUI_OpeningFcn gets called. An
unrecognized property name or invalid value makes property application
stop. All inputs are passed to matRad_importGUI_OpeningFcn via varargin.
*See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one
instance to run (singleton)".
See also: GUIDE, GUIDATA, GUIHANDLES0001 function varargout = matRad_importGUI(varargin) 0002 % MATRAD_IMPORTGUI MATLAB code for matRad_importGUI.fig 0003 % MATRAD_IMPORTGUI, by itself, creates a new MATRAD_IMPORTGUI or raises the existing 0004 % singleton*. 0005 % 0006 % H = MATRAD_IMPORTGUI returns the handle to a new MATRAD_IMPORTGUI or the handle to 0007 % the existing singleton*. 0008 % 0009 % MATRAD_IMPORTGUI('CALLBACK',hObject,eventData,handles,...) calls the local 0010 % function named CALLBACK in MATRAD_IMPORTGUI.M with the given input arguments. 0011 % 0012 % MATRAD_IMPORTGUI('Property','Value',...) creates a new MATRAD_IMPORTGUI or raises the 0013 % existing singleton*. Starting from the left, property value pairs are 0014 % applied to the GUI before matRad_importGUI_OpeningFcn gets called. An 0015 % unrecognized property name or invalid value makes property application 0016 % stop. All inputs are passed to matRad_importGUI_OpeningFcn via varargin. 0017 % 0018 % *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one 0019 % instance to run (singleton)". 0020 % 0021 % See also: GUIDE, GUIDATA, GUIHANDLES 0022 0023 % Edit the above text to modify the response to help matRad_importGUI 0024 0025 % Last Modified by GUIDE v2.5 09-Aug-2018 15:18:30 0026 0027 % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 0028 % 0029 % Copyright 2015 the matRad development team. 0030 % 0031 % This file is part of the matRad project. It is subject to the license 0032 % terms in the LICENSE file found in the top-level directory of this 0033 % distribution and at https://github.com/e0404/matRad/LICENSES.txt. No part 0034 % of the matRad project, including this file, may be copied, modified, 0035 % propagated, or distributed except according to the terms contained in the 0036 % LICENSE file. 0037 % 0038 % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 0039 0040 % Begin initialization code - DO NOT EDIT 0041 gui_Singleton = 1; 0042 gui_State = struct('gui_Name', mfilename, ... 0043 'gui_Singleton', gui_Singleton, ... 0044 'gui_OpeningFcn', @matRad_importGUI_OpeningFcn, ... 0045 'gui_OutputFcn', @matRad_importGUI_OutputFcn, ... 0046 'gui_LayoutFcn', [] , ... 0047 'gui_Callback', []); 0048 if nargin && ischar(varargin{1}) 0049 gui_State.gui_Callback = str2func(varargin{1}); 0050 end 0051 0052 if nargout 0053 [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); 0054 else 0055 gui_mainfcn(gui_State, varargin{:}); 0056 end 0057 % End initialization code - DO NOT EDIT 0058 0059 0060 % --- Executes just before matRad_importGUI is made visible. 0061 function matRad_importGUI_OpeningFcn(hObject, eventdata, handles, varargin) 0062 % This function has no output args, see OutputFcn. 0063 % hObject handle to figure 0064 % eventdata reserved - to be defined in a future version of MATLAB 0065 % handles structure with handles and user data (see GUIDATA) 0066 % varargin command line arguments to matRad_importGUI (see VARARGIN) 0067 0068 % Choose default command line output for matRad_importGUI 0069 handles.output = hObject; 0070 0071 % Update handles structure 0072 guidata(hObject, handles); 0073 0074 % UIWAIT makes matRad_importGUI wait for user response (see UIRESUME) 0075 % uiwait(handles.figure_importDialog); 0076 0077 0078 % --- Outputs from this function are returned to the command line. 0079 function varargout = matRad_importGUI_OutputFcn(hObject, eventdata, handles) 0080 % varargout cell array for returning output args (see VARARGOUT); 0081 % hObject handle to figure 0082 % eventdata reserved - to be defined in a future version of MATLAB 0083 % handles structure with handles and user data (see GUIDATA) 0084 0085 % Get default command line output from handles structure 0086 varargout{1} = handles.output; 0087 0088 0089 0090 function edit_ctPath_Callback(hObject, eventdata, handles) 0091 % hObject handle to edit_ctPath (see GCBO) 0092 % eventdata reserved - to be defined in a future version of MATLAB 0093 % handles structure with handles and user data (see GUIDATA) 0094 0095 % Hints: get(hObject,'String') returns contents of edit_ctPath as text 0096 % str2double(get(hObject,'String')) returns contents of edit_ctPath as a double 0097 0098 0099 % --- Executes during object creation, after setting all properties. 0100 function edit_ctPath_CreateFcn(hObject, eventdata, handles) 0101 % hObject handle to edit_ctPath (see GCBO) 0102 % eventdata reserved - to be defined in a future version of MATLAB 0103 % handles empty - handles not created until after all CreateFcns called 0104 0105 % Hint: edit controls usually have a white background on Windows. 0106 % See ISPC and COMPUTER. 0107 if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) 0108 set(hObject,'BackgroundColor','white'); 0109 end 0110 0111 0112 % --- Executes on button press in pushbutton_ctPath. 0113 function pushbutton_ctPath_Callback(hObject, eventdata, handles) 0114 % hObject handle to pushbutton_ctPath (see GCBO) 0115 % eventdata reserved - to be defined in a future version of MATLAB 0116 % handles structure with handles and user data (see GUIDATA) 0117 0118 [importCTFile,importCTPath,~] = uigetfile({'*.nrrd', 'NRRD-Files'}, 'Choose the CT file...'); 0119 if importCTFile ~= 0 0120 set(handles.edit_ctPath,'String',fullfile(importCTPath,importCTFile)); 0121 % Update handles structure 0122 guidata(hObject, handles); 0123 end 0124 0125 0126 0127 function listbox_maskPaths_Callback(hObject, eventdata, handles) 0128 % hObject handle to listbox_maskPaths (see GCBO) 0129 % eventdata reserved - to be defined in a future version of MATLAB 0130 % handles structure with handles and user data (see GUIDATA) 0131 0132 % Hints: get(hObject,'String') returns contents of listbox_maskPaths as text 0133 % str2double(get(hObject,'String')) returns contents of listbox_maskPaths as a double 0134 0135 0136 % --- Executes during object creation, after setting all properties. 0137 function listbox_maskPaths_CreateFcn(hObject, eventdata, handles) 0138 % hObject handle to listbox_maskPaths (see GCBO) 0139 % eventdata reserved - to be defined in a future version of MATLAB 0140 % handles empty - handles not created until after all CreateFcns called 0141 0142 % Hint: edit controls usually have a white background on Windows. 0143 % See ISPC and COMPUTER. 0144 if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) 0145 set(hObject,'BackgroundColor','white'); 0146 end 0147 0148 set(hObject,'value',[],'max',2,'min',0,'String',cell(0)); 0149 0150 0151 % --- Executes on button press in pushbutton_addMaskPaths. 0152 function pushbutton_addMaskPaths_Callback(hObject, eventdata, handles) 0153 % hObject handle to pushbutton_addMaskPaths (see GCBO) 0154 % eventdata reserved - to be defined in a future version of MATLAB 0155 % handles structure with handles and user data (see GUIDATA) 0156 0157 [importMaskFile,importMaskPath,~] = uigetfile({'*.nrrd', 'NRRD-Files'}, 'Choose the binary mask files...','MultiSelect','on'); 0158 if ~isempty(importMaskFile) 0159 if ~iscell(importMaskFile) 0160 tmpName = importMaskFile; 0161 importMaskFile = cell(1); 0162 importMaskFile{1} = tmpName; 0163 end 0164 importMaskFile = cellfun(@(filename) fullfile(importMaskPath,filename),importMaskFile,'UniformOutput',false); 0165 entries = get(handles.listbox_maskPaths,'String'); 0166 newEntries = [entries importMaskFile]; 0167 set(handles.listbox_maskPaths,'String',newEntries); 0168 % Update handles structure 0169 guidata(hObject, handles); 0170 end 0171 0172 0173 % --- Executes on button press in pushbutton_import. 0174 function pushbutton_import_Callback(hObject, eventdata, handles) 0175 % hObject handle to pushbutton_import (see GCBO) 0176 % eventdata reserved - to be defined in a future version of MATLAB 0177 % handles structure with handles and user data (see GUIDATA) 0178 0179 ctFile = get(handles.edit_ctPath,'String'); 0180 maskFiles = get(handles.listbox_maskPaths,'String'); 0181 0182 if isempty(ctFile) || isempty(maskFiles) 0183 errordlg('Please sepecify a CT and at least one mask!'); 0184 end 0185 0186 convertHU = get(handles.checkbox_huConvert,'Value'); 0187 0188 if convertHU 0189 [ct,cst] = matRad_importPatient(ctFile,maskFiles,get(handles.edit_hlut,'String')); 0190 else 0191 [ct,cst] = matRad_importPatient(ctFile,maskFiles); 0192 end 0193 0194 cst = showCheckDialog(cst); 0195 0196 assignin('base', 'ct', ct); 0197 assignin('base', 'cst', cst); 0198 0199 delete(handles.figure_importDialog); 0200 0201 0202 % --- Executes on button press in pushbutton_cancel. 0203 function pushbutton_cancel_Callback(hObject, eventdata, handles) 0204 % hObject handle to pushbutton_cancel (see GCBO) 0205 % eventdata reserved - to be defined in a future version of MATLAB 0206 % handles structure with handles and user data (see GUIDATA) 0207 delete(handles.figure_importDialog); 0208 0209 0210 % --- Executes on button press in pushbutton_addMaskFolders. 0211 function pushbutton_addMaskFolders_Callback(hObject, eventdata, handles) 0212 % hObject handle to pushbutton_addMaskFolders (see GCBO) 0213 % eventdata reserved - to be defined in a future version of MATLAB 0214 % handles structure with handles and user data (see GUIDATA) 0215 importMaskPath = uigetdir('./', 'Choose the folder containing binary mask files...'); 0216 importMaskPath = [importMaskPath filesep]; 0217 if ~isempty(importMaskPath) 0218 entries = get(handles.listbox_maskPaths,'String'); 0219 newEntries = [entries cellstr(importMaskPath)]; 0220 set(handles.listbox_maskPaths,'String',newEntries); 0221 % Update handles structure 0222 guidata(hObject, handles); 0223 end 0224 0225 % --- Executes on key press with focus on listbox_maskPaths and none of its controls. 0226 function listbox_maskPaths_KeyPressFcn(hObject, eventdata, handles) 0227 % hObject handle to listbox_maskPaths (see GCBO) 0228 % eventdata structure with the following fields (see MATLAB.UI.CONTROL.UICONTROL) 0229 % Key: name of the key that was pressed, in lower case 0230 % Character: character interpretation of the key(s) that was pressed 0231 % Modifier: name(s) of the modifier key(s) (i.e., control, shift) pressed 0232 % handles structure with handles and user data (see GUIDATA) 0233 if isequal(eventdata.Key,'delete') || isequal(eventdata.Key,'backspace') 0234 selectIndex = get(hObject,'value'); 0235 entries = get(hObject,'String'); 0236 if numel(entries) == 0 0237 return; 0238 end 0239 entries(selectIndex) = []; 0240 if selectIndex > numel(entries) && selectIndex > 1 0241 selectIndex = selectIndex - 1; 0242 end 0243 set(hObject,'String',entries,'value',selectIndex); 0244 end 0245 0246 % --- Creates a Dialog for the final adaptations to VOIs and CT conversion 0247 function cst = showCheckDialog(cst) 0248 0249 handle = dialog('Position', [100 100 400 250],'WindowStyle','modal','Name','Confirm Segmentations'); 0250 0251 %Create Table 0252 hTable = uitable('Parent',handle,'Units','normal','Position',[0.1 0.2 0.8 0.8]); 0253 hTable.Data = cst(:,2:3); 0254 hTable.ColumnName = {'Name','Type'}; 0255 hTable.ColumnWidth = {150,'auto'}; 0256 hTable.RowName = []; 0257 hTable.ColumnEditable = [true true]; 0258 hTable.ColumnFormat = {'char',{'TARGET', 'OAR', 'IGNORED'}}; 0259 0260 %Create Button 0261 hButton = uicontrol(handle,'Style','pushbutton','String','Confirm','Units','normal','Position',[0.7 0.05 0.2 0.1],'Callback','uiresume(gcbf)');%{@pushbutton_confirm_vois_callback}); 0262 try 0263 uiwait(handle); 0264 cst(:,2:3) = hTable.Data(:,:); 0265 catch 0266 warning('Closed checkdialog without confirmation! Using default cst information!'); 0267 end 0268 delete(handle); 0269 0270 0271 % --- Executes on button press in checkbox_huConvert. 0272 function checkbox_huConvert_Callback(hObject, eventdata, handles) 0273 % hObject handle to checkbox_huConvert (see GCBO) 0274 % eventdata reserved - to be defined in a future version of MATLAB 0275 % handles structure with handles and user data (see GUIDATA) 0276 0277 % Hint: get(hObject,'Value') returns toggle state of checkbox_huConvert 0278 0279 checked = get(hObject,'Value'); 0280 0281 if checked 0282 fieldState = 'on'; 0283 else 0284 fieldState = 'off'; 0285 end 0286 0287 0288 set(handles.edit_hlut,'Enable',fieldState); 0289 set(handles.pushbutton_hlutFile,'Enable',fieldState); 0290 0291 0292 function edit_hlut_Callback(hObject, eventdata, handles) 0293 % hObject handle to edit_hlut (see GCBO) 0294 % eventdata reserved - to be defined in a future version of MATLAB 0295 % handles structure with handles and user data (see GUIDATA) 0296 0297 % Hints: get(hObject,'String') returns contents of edit_hlut as text 0298 % str2double(get(hObject,'String')) returns contents of edit_hlut as a double 0299 0300 0301 % --- Executes during object creation, after setting all properties. 0302 function edit_hlut_CreateFcn(hObject, eventdata, handles) 0303 % hObject handle to edit_hlut (see GCBO) 0304 % eventdata reserved - to be defined in a future version of MATLAB 0305 % handles empty - handles not created until after all CreateFcns called 0306 0307 % Hint: edit controls usually have a white background on Windows. 0308 % See ISPC and COMPUTER. 0309 if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) 0310 set(hObject,'BackgroundColor','white'); 0311 end 0312 0313 0314 % --- Executes on button press in pushbutton_hlutFile. 0315 function pushbutton_hlutFile_Callback(hObject, eventdata, handles) 0316 % hObject handle to pushbutton_hlutFile (see GCBO) 0317 % eventdata reserved - to be defined in a future version of MATLAB 0318 % handles structure with handles and user data (see GUIDATA) 0319 0320 [importHLUTFile,importHLUTPath,~] = uigetfile({'*.hlut', 'matRad HLUT-Files'}, 'Choose the HLUT file...'); 0321 if importHLUTFile ~= 0 0322 set(handles.edit_hlut,'String',fullfile(importHLUTPath,importHLUTFile)); 0323 % Update handles structure 0324 guidata(hObject, handles); 0325 end